Mattia Cappelli
Multi-domain data fusion for colorectal cancer prognosis.
Rel. Maurizio Rebaudengo, Marta Lovino, Francesco Ponzio, Elisa Ficarra. Politecnico di Torino, Master of science program in Data Science And Engineering, 2021
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Abstract
This thesis aims to provide a methodological study in prognosis prediction for colorectal tumor, considering different types of biological data. Precisely, I will predict through survival analysis the overall survival risk, which is strictly related to the expected lifetime of cancer patients. The different types of data are histopathological images, miRNA, gene expression, methylation and clinical data. All these data are appropriately selected for the task from the TCGA-COAD project in the GDC databases. The thesis is devoted to developing an optimized framework for survival prediction in colorectal cancer patients. The focus is centred on the integration of omics data and histopathology images.
The two difficulties for the data integration are the high dimensionality of the omics and the feature extraction from the images
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